US · guidance
CMS Pub. 100-06, ch. 8, § 130
Provider Permanent File
The permanent reference files are central files that contain provider information. Where
appropriate, maintain a current permanent reference file on each provider with pertinent
information for use during interim rate reviews, desk reviews, and field audits.
Depending on the provider type and payment methodology, the following are examples
of the information that can be maintained in the permanent reference file.
A. General Information.
(1) Accounting Systems and Records
42 CFR 413.20 requires providers to maintain sufficient financial and statistical data for
proper determination of costs payable under Medicare. Standardized accounting,
statistics, and reporting practices are followed. In keeping with this requirement, establish
and maintain surveillance over the provider's capability to maintain records needed to
reflect accurate cost reporting data and other information capable of verification by
qualified auditors. Document these determinations and retain them in the permanent files.
(2) Accounting System
Request any significant modifications to the provider's accounting system as updates to
the initial system survey performed when the provider entered Medicare. Indicate
reliance upon the provider's independent accounting firms' opinions by making reference
to them in the permanent reference files.
(3) Provider's Organization
Obtain, or develop with the assistance of the provider, an organizational chart. Update it
where there are significant changes during any cost reporting period.
Document information for owners and/or partners of providers to include:
• Title of position(s) held by owner and/or partner of provider.
• The same information for officers and members of the board and their stock
ownership, if any.
• Duties and responsibilities of all owners, partners, officers, etc., as appropriate, and
individual qualifications related to the duties performed where compensation for them
is claimed in the cost report.
• Ownership or interest in other providers participating or not participating in the
program.
• Ownership or interest in any other entity doing business with the provider.
• Ownership by a chain organization, where applicable, with the name and address of
the home office, description of costs which flow from the parent organization, and the
contractor responsible for the home office audit.
• Information for nonprofit organization providers to include:
− Copy of the Internal Revenue Service certificate of nonprofit status under §501(c)
of the Internal Revenue Code; and
− Documentation to support the legal and operating name of the sponsoring
organization(s) or person(s).
• Information for providers requesting multiple-facility status for cost reimbursement
purposes includes:
− Documentation that the provider consists of several component facilities which
provide clearly different types of care; and
− Determination that the provider's records have the capability to separate costs and
revenues between the various entities of the facility.
(4) Floor Plan of Provider's Facility
If feasible, retain a copy or pertinent extracts of the facility's floor plan. Update
significant changes. Indicate that the floor plan was tested during an audit or during an
on-site visit.
(5) Provider’s State License and Medicare Tie-In Notice
If you obtain these documents as part of your field audit of the number of beds or
excluded unit/subprovider costs, retain them in your permanent file.
B Contracts for Services
(1) Services Purchased Under Arrangements
Where a provider purchases services, such as housekeeping, physical therapy,
prescription drugs, laboratory tests, etc., obtain a listing of all services furnished by
outside suppliers.
Where they are performed under contract, document information, the services to be
furnished and, where applicable, the charge or fee schedule.
(2) Property-Lease Agreements
• Maintain copies of major lease agreements or extracts for all leased parts of the
facility. Include major movable equipment or other assets.
• Determine if the lessor is related and/or if the lease agreement constitutes a lease
purchase contract. Where such circumstances exist, apply policies applicable to
either related organizations, from PRM-1, Chapter 10 or to lease-purchase
agreements, PRM-1, §110B.
(3) Provider-Based Physicians
Obtain a copy of all current written agreements or extracts, or a written summary of oral
agreements between the provider and physicians which:
• Identifies each department wh ere they work in the provider;
• Lists each physician furnishi ng services in each department;
• Describes each physician's profe ssional and provider activities;
• Describes all compensation arrangements;
• Lists any fee schedules utilized; and
• Lists billing methods selected by th e physicians with detailed information
pertaining to the specific method selected.
• Maintain amendments or new agreemen ts. Maintain copies of contracts or
extracts and results of any analyses performed. Have them available for desk
review personnel and field auditors.
(4) Management and Consultant Services
Have on file management and consultant agreements to identify the services furnished in
sufficient detail to determine if these services are necessary and proper for the delivery of
patient care and that their costs are reasonable.
(5) Franchise Arrangement
Maintain a copy of the franchise agreement and your analysis supporting the provider's
identity and evaluation of specific services furnished and made available by a franchiser,
for which the provider claims franchise fee expenses; or evidence that the provisions of
the franchise agreement do not meet the conditions necessary to include franchise
expenses.
(6) Provider's Certified Public Accounting Firm
Maintain the name of the provider's certified public accounting firm.
C Accounting Policies
(1) Capital-Related Costs
Maintain copies of documents that include the areas of capitalization, relifing of
depreciable assets, estimated useful lives of depreciable assets and componentized
depreciation. Review capital-related costs for the following areas:
• Current year assets acquisitions;
• Consistency of capitalization;
• Gain/loss on disposal of assets; and
• Relifing of assets.
(2) Fixed Assets
Identify provider assets shown on the balance sheet. Usually, a listing of assets by class,
e.g., land, buildings, equipment, indicating the acquisition date, the cost, useful life,
method of depreciation, and the annual depreciation for each asset, is sufficient to support
the asset and depreciation costs shown on the provider's financial statements.
Where such records are extensive, maintain at least a summary of the asset accounts,
updated as required. Determine if fixed asset accounting is adequate and if depreciation is
based upon guidelines included in Provider Reimbursement Manual, Part I, Chapter I.
(3) Loan or Mortgage Documents
Obtain copies (if practical) of all outstanding material loans or mortgages, or bond
indentures to establish the allowability, necessity, and reasonableness of interest expense.
(4) Exceptions to Reimbursement Limitations
Evaluate provider requests for exceptions to reimbursement limitations (e.g., limitations
on coverage of costs). Maintain a complete file to support exceptions, exemptions, and
classification adjustments.
(5) Education Program Approvals
Approved educational activities means formally organized or planned programs of study
operated by the staff of the institution. Include current copies of State licenses or
professional organization recognition, to support the determination of the acceptance of
graduate medical education, nursing school, and allied health programs.
(6) Insurance
Document the allowance of insurance costs regardless of whether they are for
commercial, self-insurance, or alternative forms to provide full coverage. Include copies
of policies where practical or pertinent extracts, copies of prior pertinent audit working
papers, and/or a summary of the key provisions which fulfill the conditions for Medicare
reimbursement.
(7) Preparation of Cost Reports
Determine whether the provider has the capability of preparing an acceptable cost report.
Where a provider proposes a change from CMS’ reporting procedure, determine whether
it properly reflects Medicare cost reporting requirements and is acceptable to CMS and
you.
(8) Deferred Compensation or Pension Plan
Have on file, for each provider having a deferred compensation or pension plan, a copy
of the written agreement or extract and all amendments existing between the provider and
participating employees which:
• Describes the method for determinin g all contributions to the fund;
• Describes the funding mechanism;
• Provides protection for the plan's assets;
• Designates the requirements for vested benefits;
• States the basis for determining th e amount of benefits to be paid;
• Describes the treatment of such items as dividends, interest income, capital gains
or losses in regard to the corpus of the fund; and
• Designates the handling of loan(s) made from the deferred compensation plan to
the provider.
History
(Rev. 107, Issued: 09-22-06; Effective: 10-01-06; Implementation: 10-02-06)
Provenance
- Source
- cms.gov
- Retrieved
- 2026-08-25
- Edition
- iom-2026-08-25
- Content hash
d9cbb61fb014028c63838c0b0d1ab0dd3a2fb35b1c58cc50e2672cf742458f85
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